(...okay, she didn't understand. Things are clear enough now, at least; this isn't the first time her shrine has been threatened.)

If you wish for your church to continue doing what it does, then the Hakurei Shrine won't interfere. However, it won't simply step down because of idle threats; there's no reason faith has to be monopolized. Should your church choose to take action against it, then it'd best prepare for an appropriate counterattack.